According to an official statement on Ryujinx’s Discord server, developer gdkchan was contacted by Nintendo and they were offered an agreement to stop working on the emulator project, and while the agreement wasn’t confirmed yet, the organization has been entirely removed.
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For anyone looking, someone Archive.org’d the final Win x64 compiled version:
https://archive.org/download/ryujinx-1.1.1403-win_x64